NC_005095.1
Genome And Source
Length
1,175
Type
ssRNA(+)
GC%
40.3%
Completeness
complete_genome
Country
Canada
Year
2023
Curation Status
100
Isolates
3
Hosts
1
Proteins
OK
Sequence
Outbreak Events
None
Associated with WTD outbreaks in prawn hatcheries; mortality mainly in larval stages with XSV co-infection
Reference
Genome-based detection methods of Macrobrachium rosenbergii nodavirus, a pathogen of the giant freshwater prawn, Macrobrachium rosenbergii dot-blot, in situ hybridization and RT-PCR.
Sri Widada J; Durand S; Cambournac I; Qian D; Shi Z; Dejonghe E; Richard V; Bonami J R
Journal of fish diseases 2003
PMID: 14653316
DOI: 10.1046/j.1365-2761.2003.00493.x
ICTV Mapping
No reviewed species-level mapping is available. Family-level ICTV references:
- Macronovirus macrobrachii (Macronovirus)
Reviewed Evidence
Only reviewed evidence linked to this sequence's source publication is shown here. Evidence from other studies is not displayed on this page.
No reviewed evidence is linked to this sequence's source publication.
Hosts
Diagnostic And Control Records
Diagnostic methods
Truncation-Enhanced Aptamer Binding Affinity and Its Potential as a Sensor for Macrobrachium rosenbergii Nodavirus Detec
Immunoassay - target not specified
medium
Proteins
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Related Literature (363 articles)
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Geographic Distribution
China
23 isolates
Canada
17 isolates
Australia
14 isolates
India
11 isolates
Thailand
8 isolates
South Korea
3 isolates
Malaysia
2 isolates
Indonesia
2 isolates
Taxonomy Information
Family
Sarthroviridae
Host Phylum
Arthropoda
Genome Type
ssRNA(+)
Discovery Method
metagenomic_with_host_evidence
Related Isolates
| Accession | Length | GC | Completeness | Country | Year |
|---|---|---|---|---|---|
| AM114036.1 | 384 | 43.2 | partial_sequence | Canada | 2023 |
| AY222839.1 | 3,202 | 44.2 | complete_genome | Canada | 2023 |
| AY222840.1 | 1,175 | 40.3 | complete_genome | Canada | 2023 |
| AY231436.2 | 3,199 | 44.4 | partial_sequence | China | 2001 |
| AY231437.2 | 1,175 | 39.8 | gene_fragment | China | 2001 |
| AY313773.1 | 630 | 46.5 | partial_sequence | N/A | 2005 |
| AY655724.2 | 872 | 42.9 | mRNA | China | 2001 |
| DQ011290.1 | 622 | 42.9 | partial_sequence | India | 2016 |
| DQ146969.1 | 859 | 43.2 | partial_sequence | India | 2008 |
| DQ189990.1 | 606 | 39.4 | mRNA | Thailand | 1999 |
| DQ459203.1 | 592 | 43.9 | partial_sequence | China | 2000 |
| DQ459204.1 | 592 | 43.9 | partial_sequence | China | 2000 |
| DQ459205.1 | 592 | 43.8 | partial_sequence | China | 2000 |
| DQ459206.1 | 592 | 43.8 | partial_sequence | China | 2000 |
| DQ459207.1 | 592 | 43.8 | partial_sequence | China | 2000 |
| DQ459208.1 | 592 | 43.9 | partial_sequence | China | 2000 |
| DQ521574.1 | 856 | 43.9 | partial_sequence | China | 2000 |
| DQ521575.1 | 1,121 | 40.7 | genome_segment | China | 2000 |
| EU150126.1 | 1,172 | 40.4 | gene_fragment | Thailand | 2007 |
| EU150127.1 | 1,170 | 40.4 | gene_fragment | Thailand | 2007 |
| EU150128.1 | 1,171 | 40.5 | gene_fragment | Thailand | 2007 |
| EU150129.1 | 1,170 | 40.9 | gene_fragment | Thailand | 2007 |
| FJ360617.1 | 302 | 39.4 | partial_sequence | Thailand | 2007 |
| FJ360618.1 | 302 | 39.7 | partial_sequence | Thailand | 2007 |
| FJ379530.1 | 682 | 39.4 | partial_sequence | Australia | 2007 |
| FJ379531.1 | 861 | 42.6 | partial_sequence | Australia | 2007 |
| FJ751225.1 | 1,175 | 39.8 | complete_genome | China | 2006 |
| FJ751226.1 | 3,126 | 44.2 | partial_sequence | China | 2006 |
| GU300102.1 | 1,116 | 41.0 | gene_fragment | India | 2011 |
| GU300103.1 | 402 | 50.2 | gene_fragment | India | 2011 |
| GU476556.1 | 658 | 38.5 | partial_sequence | Canada | 2023 |
| GU476557.1 | 477 | 39.4 | partial_sequence | Canada | 2023 |
| GU476558.1 | 657 | 38.8 | partial_sequence | Canada | 2023 |
| GU476559.1 | 472 | 37.9 | partial_sequence | Canada | 2023 |
| GU476560.1 | 336 | 38.7 | partial_sequence | Canada | 2023 |
| GU476561.1 | 658 | 38.5 | partial_sequence | Canada | 2023 |
| GU476562.1 | 658 | 38.5 | partial_sequence | Canada | 2023 |
| GU476563.1 | 658 | 38.5 | partial_sequence | Canada | 2023 |
| GU476564.1 | 626 | 36.7 | partial_sequence | Canada | 2023 |
| GU476565.1 | 622 | 37.3 | partial_sequence | Canada | 2023 |
| GU476566.1 | 637 | 36.4 | partial_sequence | Canada | 2023 |
| GU476567.1 | 658 | 38.6 | partial_sequence | Canada | 2023 |
| HM565741.1 | 1,072 | 41.2 | partial_sequence | India | 2010 |
| HQ287005.1 | 681 | 39.4 | partial_sequence | China | 2001 |
| HQ637179.1 | 1,121 | 40.9 | gene_fragment | India | 2008 |
| JN187416.1 | 3,199 | 44.5 | gene_fragment | Malaysia | 2011 |
| JN571287.1 | 423 | 41.6 | partial_sequence | China | 2001 |
| JN571288.1 | 205 | 44.4 | partial_sequence | China | 2001 |
| JN619369.1 | 3,203 | 44.5 | complete_genome | Australia | 2004 |
| JN619370.1 | 1,173 | 39.6 | complete_genome | Australia | 2004 |
| JQ418295.1 | 3,126 | 44.4 | partial_sequence | India | 2008 |
| JQ418296.1 | 1,116 | 40.7 | gene_fragment | India | 2008 |
| JQ418297.1 | 402 | 50.2 | gene_fragment | India | 2008 |
| JQ418298.1 | 1,175 | 40.2 | genome_segment | India | 2008 |
| JQ965671.1 | 1,121 | 40.4 | gene_fragment | China | 2003 |
| JQ965672.1 | 1,121 | 40.3 | gene_fragment | China | 2011 |
| JQ965673.1 | 1,121 | 40.8 | gene_fragment | China | 2001 |
| JQ965674.1 | 1,121 | 41.2 | gene_fragment | China | 2011 |
| JQ965675.1 | 1,121 | 40.4 | gene_fragment | China | 2011 |
| JQ965676.1 | 1,121 | 41.2 | gene_fragment | China | 2011 |
| KF824532.1 | 1,112 | 40.9 | partial_sequence | Indonesia | 2011 |
| KF824533.1 | 1,312 | 46.0 | partial_sequence | Indonesia | 2011 |
| KJ000009.1 | 1,125 | 39.7 | genome_segment | Malaysia | 2010 |
| KP941742.1 | 1,138 | 40.3 | gene_fragment | China | 2001 |
| KY496616.1 | 1,175 | 40.6 | mRNA | Thailand | 2015 |
| MG063722.1 | 205 | 43.4 | mRNA | India | 2017 |
| NC_005094 | 3,202 | N/A | N/A | N/A | N/A |
| NC_005094.1 | 3,202 | 44.2 | complete_genome | Canada | 2023 |
| NC_005095 | 1,175 | N/A | N/A | N/A | N/A |
| NC_005095.1 | 1,175 | 40.3 | complete_genome | Canada | 2023 |
| OP434475.1 | 205 | 43.9 | partial_sequence | South Korea | 2021 |
| OP434476.1 | 205 | 43.9 | partial_sequence | South Korea | 2021 |
| OP434477.1 | 205 | 43.9 | partial_sequence | South Korea | 2021 |
| OP508292.1 | 3,117 | 44.7 | gene_fragment | Australia | 2020 |
| OP508293.1 | 3,117 | 44.7 | gene_fragment | Australia | 2020 |
| OP508294.1 | 3,117 | 44.6 | gene_fragment | Australia | 2020 |
| OP508295.1 | 3,117 | 44.1 | gene_fragment | Australia | 2020 |
| OP508296.1 | 3,117 | 44.1 | gene_fragment | Australia | 2020 |
| OP508297.1 | 1,116 | 40.5 | gene_fragment | Australia | 2020 |
| OP508298.1 | 1,116 | 40.4 | gene_fragment | Australia | 2020 |
| OP508299.1 | 1,116 | 40.2 | gene_fragment | Australia | 2020 |
| OP508300.1 | 1,116 | 40.3 | gene_fragment | Australia | 2020 |
| OP508301.1 | 1,116 | 40.4 | gene_fragment | Australia | 2020 |
| PX942099.1 | N/A | N/A | unknown | N/A | 2022 |
| PX942102.1 | N/A | N/A | unknown | N/A | 2022 |
| PX942105.1 | N/A | N/A | unknown | N/A | 2022 |
| PX942111.1 | N/A | N/A | unknown | N/A | 2022 |
| PX942113.1 | N/A | N/A | unknown | N/A | 2022 |
| PX942134.1 | N/A | N/A | unknown | N/A | 2022 |
| PX942135.1 | N/A | N/A | unknown | N/A | 2022 |
| PX942143.1 | N/A | N/A | unknown | N/A | 2022 |
| PX942152.1 | N/A | N/A | unknown | N/A | 2023 |
| PX942153.1 | N/A | N/A | unknown | N/A | 2023 |
| PX942158.1 | N/A | N/A | unknown | N/A | 2022 |
| PX942167.1 | N/A | N/A | unknown | N/A | 2022 |
| PX942190.1 | N/A | N/A | unknown | N/A | 2022 |
| PX942191.1 | N/A | N/A | unknown | N/A | 2022 |
| PX942207.1 | N/A | N/A | unknown | N/A | 2022 |
| PX942217.1 | N/A | N/A | unknown | N/A | 2022 |
| PZ065988.1 | N/A | N/A | unknown | N/A | N/A |
Sequence
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